Greiff, Victor: search on Z-Library

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1

Comparison of methods for phylogenetic B-cell lineage inference using time-resolved antibody repertoire simulations (AbSim)

Yermanos, Alexander, Greiff, Victor, Krautler, Nike Julia, Menzel, Ulrike, Dounas, Andreas, Miho, Enkelejda, Oxenius, Annette, Stadler, Tanja, Reddy, Sai T

Journal:

Year:

2017

Language:

english

File:

PDF, 460 KB

english, 2017

2

IgM Antibody Repertoire Fingerprints in Mice Are Personalized but Robust to Viral Infection Status

Yermanos, Alexander, KrÃ¤utler, Nike Julia, Pedrioli, Alessandro, Menzel, Ulrike, Greiff, Victor, Stadler, Tanja, Oxenius, Annette, Reddy, Sai T.

Journal:

Frontiers in Cellular and Infection Microbiology

Year:

2020

File:

PDF, 1.72 MB

2020

3

Influenza vaccine response profiles are affected by vaccine preparation and preexisting immunity, but not HIV infection

Berger, Christoph T, Greiff, Victor, Mehling, Matthias, Fritz, Stefanie, Meier, Marc A, Hoenger, Gideon, Conen, Anna, Recher, Mike, Battegay, Manuel, Reddy, Sai T, Hess, Christoph

Journal:

Human Vaccines & Immunotherapeutics

Year:

2015

Language:

english

File:

PDF, 1.48 MB

english, 2015

4

Resident memory CD8 T cells persist for years in human small intestine

Bartolomé-Casado, Raquel, Landsverk, Ole J.B., Chauhan, Sudhir Kumar, Richter, Lisa, Phung, Danh, Greiff, Victor, Risnes, Louise F., Yao, Ying, Neumann, Ralf S., Yaqub, Sheraz, Øyen, Ole, Horneland, R

Journal:

Journal of Experimental Medicine

Year:

2019

Language:

english

File:

PDF, 3.72 MB

english, 2019

5

Augmenting adaptive immunity: progress and challenges in the quantitative engineering and analysis of adaptive immune receptor repertoires

Brown, Alex J., Snapkov, Igor, Akbar, Rahmad, Pavlović, Milena, Miho, Enkelejda, Sandve, Geir K., Greiff, Victor

Journal:

Mol. Syst. Des. Eng.

Year:

2019

File:

PDF, 4.34 MB

2019

6

immuneSIM: tunable multi-feature simulation of B- and T-cell receptor repertoires for immunoinformatics benchmarking

Weber, CÃ©dric R, Akbar, Rahmad, Yermanos, Alexander, PavloviÄ, Milena, Snapkov, Igor, Sandve, Geir K, Reddy, Sai T, Greiff, Victor, Schwartz, Russell

Journal:

Year:

2020

File:

PDF, 251 KB

2020

7

Chronic Viral Infection Promotes Efficient Germinal Center B Cell Responses

Fallet, BÃ©nÃ©dict, Hao, Yi, Florova, Marianna, Cornille, Karen, de los Aires, Alba Verge, Girelli Zubani, Giulia, Ertuna, Yusuf I., Greiff, Victor, Menzel, Ulrike, Hammad, Karim, Merkler, Doron, Redd

Journal:

Year:

2020

Language:

english

File:

PDF, 4.41 MB

english, 2020

8

The TCR Repertoire Reconstitution in Multiple Sclerosis: Comparing One-Shot and Continuous Immunosuppressive Therapies

Amoriello, Roberta, Greiff, Victor, Aldinucci, Alessandra, Bonechi, Elena, Carnasciali, Alberto, Peruzzi, Benedetta, Repice, Anna Maria, Mariottini, Alice, Saccardi, Riccardo, Mazzanti, Benedetta, Mas

Journal:

Frontiers in Immunology

Year:

2020

File:

PDF, 2.70 MB

2020

9

Comprehensive Evaluation and Optimization of Amplicon Library Preparation Methods for High-Throughput Antibody Sequencing

Menzel, Ulrike, Greiff, Victor, Khan, Tarik A., Haessler, Ulrike, Hellmann, Ina, Friedensohn, Simon, Cook, Skylar C., Pogson, Mark, Reddy, Sai T., Unutmaz, Derya

Journal:

Year:

2014

Language:

english

File:

PDF, 1.41 MB

english, 2014

10

Learning the High-Dimensional Immunogenomic Features That Predict Public and Private Antibody Repertoires

Greiff, Victor, Weber, Cédric R., Palme, Johannes, Bodenhofer, Ulrich, Miho, Enkelejda, Menzel, Ulrike, Reddy, Sai T.

Journal:

The Journal of Immunology

Year:

2017

Language:

english

File:

PDF, 2.25 MB

english, 2017

11

Large-scale network analysis reveals the sequence space architecture of antibody repertoires

Miho, Enkelejda, Roškar, Rok, Greiff, Victor, Reddy, Sai T.

Journal:

Nature Communications

Year:

2019

Language:

english

File:

PDF, 1.03 MB

english, 2019

12

Benchmarking immunoinformatic tools for the analysis of antibody repertoire sequences

Smakaj, Erand, Babrak, Lmar, Ohlin, Mats, Shugay, Mikhail, Briney, Bryan, Tosoni, Deniz, Galli, Christopher, Grobelsek, Vendi, D’Angelo, Igor, Olson, Branden, Reddy, Sai, Greiff, Victor, Trück, Johann

Journal:

Year:

2019

File:

PDF, 680 KB

2019

13

A minimal model of peptide binding predicts ensemble properties of serum antibodies

Victor Greiff, Henning Redestig, Juliane Lück, Nicole Bruni, Atijeh Valai, Susanne Hartmann, Sebastian Rausch, Johannes Schuchhardt, Michal Or-Guil

Journal:

Year:

2012

Language:

english

File:

PDF, 344 KB

english, 2012

14

Errata. Theory in the Case of Unsymmetric Valence Type Electrolytes

LaMer, Victor, Gronwall, T, Greiff, Lotti

Journal:

Journal of Physical Chemistry

Year:

1930

Language:

english

File:

PDF, 108 KB

english, 1930

15

Resident memory CD8 T cells persist for years in human small intestine

Bartolomé-Casado, Raquel, Landsverk, Ole J.B., Chauhan, Sudhir Kumar, Richter, Lisa, Phung, Danh, Greiff, Victor, Risnes, Louise F., Yao, Ying, Neumann, Ralf S., Yaqub, Sheraz, Øyen, Ole, Horneland, R

Journal:

Journal of Experimental Medicine

Year:

2019

File:

PDF, 3.72 MB

2019

16

Mucosal or systemic microbiota exposures shape the BÂ cell repertoire

Li, Hai, Limenitakis, Julien P., Greiff, Victor, Yilmaz, Bahtiyar, SchÃ¤ren, Olivier, Urbaniak, Camilla, ZÃ¼nd, Mirjam, Lawson, Melissa A. E., Young, Ian D., Rupp, Sandra, HeikenwÃ¤lder, Mathias, McCo

Journal:

Year:

2020

File:

PDF, 19.23 MB

2020

17

Quantitative assessment of the robustness of next-generation sequencing of antibody variable gene repertoires from immunized mice

Greiff, Victor, Menzel, Ulrike, Haessler, Ulrike, Cook, Skylar C, Friedensohn, Simon, Khan, Tarik A, Pogson, Mark, Hellmann, Ina, Reddy, Sai T

Journal:

Year:

2014

Language:

english

File:

PDF, 5.22 MB

english, 2014

18

Errata. Theory in the Case of Unsymmetric Valence Types of Electrolytes

LaMer, Victor, Gronwall, T, Greiff, Lotti

Journal:

Journal of Physical Chemistry

Year:

1930

Language:

english

File:

PDF, 88 KB

english, 1930

19

Mining adaptive immune receptor repertoires for biological and clinical information using machine learning

Greiff, Victor, Yaari, Gur, Cowell, Lindsay

Journal:

Current Opinion in Systems Biology

Year:

2020

File:

PDF, 1.41 MB

2020

20

Editorial: Methods and Applications of Computational Immunology

Chain, Benny, Greiff, Victor, Textor, Johannes, Yaari, Gur

Journal:

Frontiers in Immunology

Year:

2019

Language:

english

File:

PDF, 153 KB

english, 2019

21

High-throughput antibody engineering in mammalian cells by CRISPR/Cas9-mediated homology-directed mutagenesis

Mason, Derek M, Weber, Cédric R, Parola, Cristina, Meng, Simon M, Greiff, Victor, Kelton, William J, Reddy, Sai T

Journal:

Nucleic Acids Research

Year:

2018

Language:

english

File:

PDF, 3.85 MB

english, 2018

22

Persistence of intrathecal oligoclonal B cells and IgG in multiple sclerosis

Tomescu-Baciu, Alina, Johansen, Jorunn N., Holmøy, Trygve, Greiff, Victor, Stensland, Maria, de Souza, Gustavo Antonio, Vartdal, Frode, Lossius, Andreas

Journal:

Journal of Neuroimmunology

Year:

2019

Language:

english

File:

PDF, 7.20 MB

english, 2019

23

Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires

Miho, Enkelejda, Yermanos, Alexander, Weber, Cédric R., Berger, Christoph T., Reddy, Sai T., Greiff, Victor

Journal:

Frontiers in Immunology

Year:

2018

Language:

english

File:

PDF, 637 KB

english, 2018

24

Persistence of intrathecal oligoclonal B cells and IgG in multiple sclerosis

Tomescu-Baciu, Alina, Johansen, Jorunn N., Holmøy, Trygve, Greiff, Victor, Stensland, Maria, de Souza, Gustavo Antonio, Vartdal, Frode, Lossius, Andreas

Journal:

Journal of Neuroimmunology

Year:

2019

File:

PDF, 7.20 MB

2019

25

Bioinformatic and Statistical Analysis of Adaptive Immune Repertoires

Greiff, Victor, Miho, Enkelejda, Menzel, Ulrike, Reddy, Sai T.

Journal:

Trends in Immunology

Year:

2015

Language:

english

File:

PDF, 2.26 MB

english, 2015

26

A bioinformatic framework for immune repertoire diversity profiling enables detection of immunological status

Greiff, Victor, Bhat, Pooja, Cook, Skylar C., Menzel, Ulrike, Kang, Wenjing, Reddy, Sai T.

Journal:

Genome Medicine

Year:

2015

Language:

english

File:

PDF, 5.91 MB

english, 2015

27

Systems Analysis Reveals High Genetic and Antigen-Driven Predetermination of Antibody Repertoires throughout B Cell Development

Greiff, Victor, Menzel, Ulrike, Miho, Enkelejda, Weber, Cédric, Riedel, René, Cook, Skylar, Valai, Atijeh, Lopes, Telma, Radbruch, Andreas, Winkler, Thomas H., Reddy, Sai T.

Journal:

Year:

2017

Language:

english

File:

PDF, 3.25 MB

english, 2017

28

Inter- and intraspecies comparison of phylogenetic fingerprints and sequence diversity of immunoglobulin variable genes

Yermanos, Alexander, Dounas, Andreas, Greiff, Victor, Stadler, Tanja, Oxenius, Annette, Reddy, Sai T.

Journal:

Year:

2020

File:

PDF, 3.14 MB

2020

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